QUAST

QUAST stands for QUality ASsessment Tool. It evaluates genome/metagenome assemblies by computing various metrics.

To load QUAST on Palmetto 2:

module load biocontainers
module load quast

tip

Several other tools load with this module. Review additional available tools using the command below:

report_subtools.sh quast

To see an example of usage please see the official QUAST GitHub page.

Parallel Capabilities: Multithreading default.