RepeatMasker

RepeatMasker screens DNA sequences for interspersed repeats and low complexity sequences. At minimum the input requires a sequence and return format. For output it provides a detailed annotation of the repeats that are present in the query sequence as well as a modified version of the query sequence in which the annotated repeats have been masked. The documentation page breaks down the output files in more detail and users are recommended to review that material.

For additional information please see the documentation

ml biocontainers repeatmasker
RepeatMasker --species <species> <Sequence.fa>

Parallel Capabilities: Single core only.